Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P25135 625.1735 626.1806 114
P26628 899.3808 900.3929 114
P26865 Epurpurin A 424.2186 425.2236 114
P27019 597.3069 598.3151 114
P28022 Glomosporin 973.4976 974.5013 114
P28168 1092.3358 1093.3411 114
P30533 363.0742 364.0826 114
P30814 Isopongaflavone 334.1217 335.1273 114
P30931 methyl 5S,6S-diacetoxy-9-oxo-10-chloro-12S-hydroxy-10E,14Z-prostadienoate-cyclo[8R,12S] 500.2216 501.2272 114
P31780 Gomisin E 514.2198 515.2253 114

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G128200 hypothetical protein NA 1,463
Glyma.14G068500 hypothetical protein NA 1,452
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1,439
Glyma.16G139000 hypothetical protein NA 1,430
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1,414
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1,414
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class transcription factor (DUF630 and DUF632) 1,364
Glyma.06G305300 hypothetical protein NA 1,332
Glyma.13G203900 hypothetical protein NA 1,329
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1,324