Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P16525 Isoginkgetin 7-O-beta-D-glucopyranoside 728.1731 729.1824 115
P19420 Homoneoharringtonine 549.2405 550.2453 115
P19653 750.2553 751.2633 115
P19780 Lappaol D 568.2302 569.2391 115
P20216 Histidylhistidine 292.1273 293.1352 115
P21207 Dapriamicin A 511.1949 512.2013 115
P22565 Androstane-3,17-diol 17-sulfate 372.1984 373.2057 115
P22629 N-4-[2(R)-Amino-3-mercaptopropyl]amino-2-naphthylbenzoyl-(L)-leucine, TFA 465.2079 466.2159 115
P22895 FD 212 268.1299 269.1362 115
P23137 Fentrazamide 349.1306 350.1360 115

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G128200 hypothetical protein NA 1,463
Glyma.14G068500 hypothetical protein NA 1,452
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1,439
Glyma.16G139000 hypothetical protein NA 1,430
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1,414
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1,414
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class transcription factor (DUF630 and DUF632) 1,364
Glyma.06G305300 hypothetical protein NA 1,332
Glyma.13G203900 hypothetical protein NA 1,329
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1,324