Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P14703 Dillapional 236.0658 237.0736 195
P30058 Koraiol 222.1951 223.2018 195
P12116 o-Methylacetophenone 134.0716 135.0790 194
P16820 Petunidin 3-(6''-malonylglucoside) 564.1095 565.1176 194
P28303 Nannochelin B 754.3070 755.3117 194
P37556 807.4435 808.4480 194
P41491 677.8221 678.8305 194
P01926 Hyacinthacine A4 187.1208 188.1264 193
P06218 Repaglinide 452.2673 453.2779 193
P08723 (2R,3R,5R)-2-(S-Pantetheinyl)-carbapenam-3-carboxylate 431.1720 432.1820 193

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G152200 hypothetical protein NA 56
Glyma.20G105900 hypothetical protein AT2G16990:AT2G16990:Major facilitator superfamily protein 56
Glyma.20G129900 hypothetical protein NA 56
Glyma.02G116900 hypothetical protein NA 55
Glyma.05G169100 hypothetical protein NA 55
Glyma.09G270000 hypothetical protein AT3G54220:SCR:GRAS family transcription factor 55
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 55
Glyma.16G137800 hypothetical protein NA 55
Glyma.16G141500 bZIP117 AT4G36730:GBF1:G-box binding factor 1 55
Glyma.17G211500 hypothetical protein AT4G32272:AT4G32272:Nucleotide/sugar transporter family protein 55