Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24428 Talniflumate 414.0784 415.0855 205
P25466 Niazinin 343.1126 344.1185 205
P15762 Aristoloterpenate II 527.1950 528.2020 204
P03342 D-Alanyl-alanyl-poly(glycerolphosphate) 314.0858 315.0931 203
P05821 Pandangolide 3 362.1408 363.1478 203
P12578 4E,6E-undecenal 166.1341 167.1417 203
P14723 1-(9Z-octadecenoyl)-2-(5-oxo-7-carboxy-6E-heptenoyl)-sn-glycero-3-phosphoserine 691.3337 692.3416 203
P53229 Leurubicin 656.2476 657.2525 203
P13994 2-Methyl-1-hydroxypropyl-ThPP 496.0955 497.1062 202
P39176 Microtoenin C 941.5023 942.5093 202

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G152200 hypothetical protein NA 56
Glyma.20G105900 hypothetical protein AT2G16990:AT2G16990:Major facilitator superfamily protein 56
Glyma.20G129900 hypothetical protein NA 56
Glyma.02G116900 hypothetical protein NA 55
Glyma.05G169100 hypothetical protein NA 55
Glyma.09G270000 hypothetical protein AT3G54220:SCR:GRAS family transcription factor 55
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 55
Glyma.16G137800 hypothetical protein NA 55
Glyma.16G141500 bZIP117 AT4G36730:GBF1:G-box binding factor 1 55
Glyma.17G211500 hypothetical protein AT4G32272:AT4G32272:Nucleotide/sugar transporter family protein 55