Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22734 Apigenosylide A 858.3447 859.3527 142
P32552 Briaexcavatolide N 480.1962 481.2002 142
P43465 907.9905 908.9925 142
P44266 Tylosin B 771.4372 772.4436 142
P53116 243.8782 244.8856 142
P04648 (5S)-5-(7-Benzofuranyl)-8-chloro-3-methyl-1,2,4,5-tetrahydro-3-benzazepin-7-ol 327.1057 328.1121 141
P05425 Flucythrinate 451.1546 452.1637 141
P06073 Indol-3-ylacetyl-myo-inositol L-arabinoside 469.1542 470.1624 141
P07929 Glycozolone A 252.1271 253.1325 141
P09365 Leucyl-Aspartate 246.1187 247.1238 141

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G116300 hypothetical protein AT4G35570:HMGB5:high mobility group B5__AT2G17560:HMGB4:high mobility group B4 57
Glyma.17G199600 hypothetical protein AT2G45330:emb1067:RNA 2'-phosphotransferase, Tpt1 / KptA family 57
Glyma.18G265500 hypothetical protein AT5G39250:AT5G39250:F-box family protein 57
Glyma.20G021900 hypothetical protein AT5G37340:AT5G37340:ZPR1 zinc-finger domain protein 57
Glyma.20G022000 hypothetical protein NA 57
Glyma.20G105000 F-box/LRR-repeat protein 10 AT2G17020:AT2G17020:F-box/RNI-like superfamily protein 57
Glyma.20G218100 hypothetical protein AT1G32900:GBSS1:UDP-Glycosyltransferase superfamily protein 57
Glyma.04G098100 hypothetical protein AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein 56
Glyma.04G235400 hypothetical protein AT3G49260:iqd21:IQ-domain 21 56
Glyma.10G028600 hypothetical protein NA 56