Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P10446 Euchrenone a14 472.2284 473.2320 168
P13647 982.2182 983.2289 168
P13935 Malvidin 3-glucoside-5-(6-acetylglucoside) 698.1805 699.1815 168
P19115 Israpafant 488.1842 489.1914 168
P22796 Argylioside 704.2463 705.2566 168
P33387 Altretamine 210.1598 211.1668 168
P37674 Blebbistatin 292.1218 293.1314 168
P42321 N3-Cyclopropyl-7-[(4-propan-2-ylphenyl)methyl]pyrrolo[3,2-f]quinazoline-1,3-diamine 371.2129 743.4342 168
P45697 Cadalene 198.1396 199.1481 168
P06307 915.2578 916.2666 167

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G116300 hypothetical protein AT4G35570:HMGB5:high mobility group B5__AT2G17560:HMGB4:high mobility group B4 57
Glyma.17G199600 hypothetical protein AT2G45330:emb1067:RNA 2'-phosphotransferase, Tpt1 / KptA family 57
Glyma.18G265500 hypothetical protein AT5G39250:AT5G39250:F-box family protein 57
Glyma.20G021900 hypothetical protein AT5G37340:AT5G37340:ZPR1 zinc-finger domain protein 57
Glyma.20G022000 hypothetical protein NA 57
Glyma.20G105000 F-box/LRR-repeat protein 10 AT2G17020:AT2G17020:F-box/RNI-like superfamily protein 57
Glyma.20G218100 hypothetical protein AT1G32900:GBSS1:UDP-Glycosyltransferase superfamily protein 57
Glyma.04G098100 hypothetical protein AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein 56
Glyma.04G235400 hypothetical protein AT3G49260:iqd21:IQ-domain 21 56
Glyma.10G028600 hypothetical protein NA 56