Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28501 433.2605 434.2679 177
P28558 400.6988 401.7068 177
P29734 Stemphyloxin I 382.2333 383.2392 177
P30823 181.0450 182.0523 177
P38200 4-(2-Chlorophenoxy)-N-[3-(methylcarbamoyl)phenyl]piperidine-1-carboxamide 387.1344 388.1406 177
P39722 Pellynol H 510.3657 511.3732 177
P43007 407.3600 408.3681 177
P43793 Acetyl-alpha-methylfentanyl 336.2200 337.2268 177
P45177 Fargoside D 778.4081 779.4154 177
P05243 5'-Deoxy-5'-fluoroadenosine 269.0921 270.0999 176

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G116300 hypothetical protein AT4G35570:HMGB5:high mobility group B5__AT2G17560:HMGB4:high mobility group B4 57
Glyma.17G199600 hypothetical protein AT2G45330:emb1067:RNA 2'-phosphotransferase, Tpt1 / KptA family 57
Glyma.18G265500 hypothetical protein AT5G39250:AT5G39250:F-box family protein 57
Glyma.20G021900 hypothetical protein AT5G37340:AT5G37340:ZPR1 zinc-finger domain protein 57
Glyma.20G022000 hypothetical protein NA 57
Glyma.20G105000 F-box/LRR-repeat protein 10 AT2G17020:AT2G17020:F-box/RNI-like superfamily protein 57
Glyma.20G218100 hypothetical protein AT1G32900:GBSS1:UDP-Glycosyltransferase superfamily protein 57
Glyma.04G098100 hypothetical protein AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein 56
Glyma.04G235400 hypothetical protein AT3G49260:iqd21:IQ-domain 21 56
Glyma.10G028600 hypothetical protein NA 56