Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31675 N-Deisopropyl-fluvastatin 369.1340 370.1426 184
P34634 1-(4-Hydroxy-3,5-dimethoxyphenyl)-7-(4-hydroxy-3-methoxyphenyl)-3,5-heptanediol 406.1959 407.2047 184
P38526 509.1856 510.1928 184
P46681 Selanc 751.4280 752.4357 184
P46758 Cyclovirobuxeine F 560.3627 561.3709 184
P06565 N-[(5-{2-[(6R)-2-Amino-4-oxo-3,4,5,6,7,8-hexahydropyrido[2,3-D]pyrimidin-6-YL]ethyl}-2-thienyl)carbonyl]-L-glutamic acid 449.1443 450.1521 183
P13918 Trifuhalol B 390.0568 391.0648 183
P15055 alpha-(Dimethylaminomethyl)-2-(3-ethyl-5-methyl-4-isoxazolyl)-1H-indole-3-methanol 313.1763 314.1834 183
P15192 Mycalolide A 908.4443 909.4491 183
P20611 cis-1,2-Dihydroxy-1,2-dihydro-7-hydroxymethylnaphthalene 192.0788 193.0851 183

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G068500 hypothetical protein AT3G54980:AT3G54980:Pentatricopeptide repeat (PPR) superfamily protein__AT2G39230:LOJ:LATERAL ORGAN JUNCTION 57
Glyma.11G166100 hypothetical protein AT2G30110:UBA1:ubiquitin-activating enzyme 1 57
Glyma.11G166200 hypothetical protein NA 57
Glyma.11G167800 hypothetical protein NA 57
Glyma.11G171200 hypothetical protein AT5G58610:AT5G58610:PHD finger transcription factor 57
Glyma.11G172200 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 57
Glyma.12G007700 hypothetical protein NA 57
Glyma.12G095500 hypothetical protein AT3G44150:AT3G44150:Expp1 protein 57
Glyma.12G196800 hypothetical protein AT4G15180:SDG2:SET domain protein 2 57
Glyma.15G037600 hypothetical protein AT2G29050:RBL1:RHOMBOID-like 1 57