Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41899 Cycloshizukaol A 548.2461 549.2553 219
P49571 Olopatadine n-oxide 353.1566 354.1633 219
P03782 Kikumycin B 317.1599 318.1657 218
P08166 742.1240 743.1314 218
P20028 beta-D-Glucopyranosyl anthranilate 299.1011 300.1073 218
P22124 392.6469 393.6511 218
P27938 Peneciraistin C 398.1535 399.1601 218
P36141 3b-Hydroxy-6b-(3-chloro-2-hydroxy-2-methylbutanoyloxy)-7(11)-eremophilen-12,8b-olide 400.1684 401.1770 218
P36494 5-Hydroxy-1-methylpyrrolidin-2-one 115.0624 116.0694 218
P45909 222.1575 223.1662 218

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G219000 hypothetical protein NA 59
Glyma.18G090700 hypothetical protein NA 59
Glyma.01G096700 hypothetical protein NA 58
Glyma.02G126800 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein__AT3G25540:LAG1:TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein 58
Glyma.03G007900 hypothetical protein NA 58
Glyma.03G063600 hypothetical protein AT2G38120:AUX1:Transmembrane amino acid transporter family protein 58
Glyma.07G209600 hypothetical protein NA 58
Glyma.09G056400 hypothetical protein NA 58
Glyma.09G067600 hypothetical protein NA 58
Glyma.11G238100 hypothetical protein AT4G39820:AT4G39820:Tetratricopeptide repeat (TPR)-like superfamily protein 58