Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45405 Tabun 162.0554 163.0611 139
P01361 Arctinol 264.0284 265.0373 138
P04584 2-Methylacetoacetic acid 116.0478 117.0546 138
P06382 eribaxaban 484.1280 485.1368 138
P10526 3,4,5-Trimethoxyphenyl acetate 226.0836 227.0894 138
P15136 799.3134 800.3211 138
P21419 Hemiphroside A 668.2311 669.2398 138
P26172 6'-Oxolividamine 305.1605 306.1677 138
P26977 Benzyl chloroacetate 184.0295 185.0374 138
P27453 6alpha,9alpha-Difluoroprednisolone-17-butyrate 466.2166 467.2245 138

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G299500 hypothetical protein AT2G43160:AT2G43160:ENTH/VHS family protein 60
Glyma.19G040100 hypothetical protein AT3G02460:AT3G02460:Ypt/Rab-GAP domain of gyp1p superfamily protein 60
Glyma.19G041000 hypothetical protein NA 60
Glyma.06G133700 Pyridoxal reductase, chloroplastic AT5G53580:PLR1:NAD(P)-linked oxidoreductase superfamily protein 59
Glyma.06G202300 SF3'H1 flavonoid 3'-hydroxylase AT5G07990:TT7:Cytochrome P450 superfamily protein 59
Glyma.06G293300 hypothetical protein AT4G28280:LLG3:LORELEI-LIKE-GPI ANCHORED PROTEIN 3 59
Glyma.06G322000 hypothetical protein AT5G56170:LLG1:LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 59
Glyma.14G135400 hypothetical protein AT2G24570:WRKY17:WRKY DNA-binding protein 17 59
Glyma.16G144300 hypothetical protein NA 59
Glyma.16G165300 hypothetical protein NA 59