Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P37887 | Starch acetate | 306.0940 | 307.1009 | 207 |
| P41794 | Xylogranatin A | 642.2652 | 643.2735 | 207 |
| P50979 | 261.2154 | 262.2224 | 207 | |
| P55337 | Fagopyrine | 670.2326 | 671.2406 | 207 |
| P18076 | (S)-4-(2,4-Difluoro-5-(pyrimidin-5-yl)phenyl)-4-methyl-5,6-dihydro-4H-1,3-thiazin-2-amine | 320.0919 | 321.0978 | 206 |
| P24832 | Stercobilin | 594.3421 | 595.3505 | 206 |
| P37255 | (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid | 454.3399 | 455.3477 | 206 |
| P08444 | (1R,6S)-6-Amino-5-oxocyclohex-2-ene-1-carboxylate | 155.0591 | 156.0664 | 205 |
| P13362 | Quercetin 3-coumaroyl-triglucoside | 488.1517 | 489.1566 | 205 |
| P15731 | HDMBOA-Glc | 387.1176 | 388.1224 | 205 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.18G299500 | hypothetical protein | AT2G43160:AT2G43160:ENTH/VHS family protein | 60 | |
| Glyma.19G040100 | hypothetical protein | AT3G02460:AT3G02460:Ypt/Rab-GAP domain of gyp1p superfamily protein | 60 | |
| Glyma.19G041000 | hypothetical protein | NA | 60 | |
| Glyma.06G133700 | Pyridoxal reductase, chloroplastic | AT5G53580:PLR1:NAD(P)-linked oxidoreductase superfamily protein | 59 | |
| Glyma.06G202300 | SF3'H1 | flavonoid 3'-hydroxylase | AT5G07990:TT7:Cytochrome P450 superfamily protein | 59 |
| Glyma.06G293300 | hypothetical protein | AT4G28280:LLG3:LORELEI-LIKE-GPI ANCHORED PROTEIN 3 | 59 | |
| Glyma.06G322000 | hypothetical protein | AT5G56170:LLG1:LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 | 59 | |
| Glyma.14G135400 | hypothetical protein | AT2G24570:WRKY17:WRKY DNA-binding protein 17 | 59 | |
| Glyma.16G144300 | hypothetical protein | NA | 59 | |
| Glyma.16G165300 | hypothetical protein | NA | 59 |