Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26031 Metoprolol 267.1800 268.1874 149
P29319 631.7931 632.7963 149
P29919 1,10-Epoxy-aristolane 220.1810 441.3700 149
P37738 Taxuspine A 728.3220 729.3304 149
P41603 TMC 96 356.1940 357.2010 149
P41889 Labradimil 1097.5501 1098.5538 149
P44481 1-dodecanoyl-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 726.4307 727.4379 149
P47929 CJ 14877 211.0862 212.0930 149
P48259 1a,1b-dihomo-5,9,11-trihydroxy-6E,14Z-prostadienoic acid-cyclo[8,12] 382.2739 383.2824 149
P49915 (6Z,8Z)-Hexadeca-6,8-dienedioylcarnitine 425.2704 426.2768 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G205800 AP1A agamous-like MADS-box AT5G60910:AGL8:AGAMOUS-like 8 61
Glyma.06G206000 hypothetical protein AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein 61
Glyma.14G198800 hypothetical protein AT1G07030:AT1G07030:Mitochondrial substrate carrier family protein 61
Glyma.14G205100 hypothetical protein NA 61
Glyma.15G215400 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 61
Glyma.16G158300 hypothetical protein AT5G43140:AT5G43140:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 61
Glyma.16G158400 hypothetical protein AT5G48100:TT10:Laccase/Diphenol oxidase family protein 61
Glyma.02G127400 hypothetical protein AT1G26190:AT1G26190:Phosphoribulokinase / Uridine kinase family 60
Glyma.13G055200 hypothetical protein AT3G02200:AT3G02200:Proteasome component (PCI) domain protein 60
Glyma.15G215600 hypothetical protein NA 60