Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45201 Reduced ketanserin 397.1809 398.1901 151
P46667 1558.8251 780.4180 151
P50770 195.5809 196.5888 151
P55369 Amprenavir 505.2250 506.2316 151
P04083 2-[(4-Phenoxyphenyl)sulfonylmethyl]thiirane 306.0384 307.0460 150
P04213 5,6-Dihydroxy-7,8,4'-trimethoxyflavanone 346.1039 347.1114 150
P06527 242.0408 243.0484 150
P06756 Sertraline 305.0731 306.0811 150
P08828 Thorectandramine 437.1702 438.1784 150
P09793 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1184 427.1241 150

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G205800 AP1A agamous-like MADS-box AT5G60910:AGL8:AGAMOUS-like 8 61
Glyma.06G206000 hypothetical protein AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein 61
Glyma.14G198800 hypothetical protein AT1G07030:AT1G07030:Mitochondrial substrate carrier family protein 61
Glyma.14G205100 hypothetical protein NA 61
Glyma.15G215400 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 61
Glyma.16G158300 hypothetical protein AT5G43140:AT5G43140:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 61
Glyma.16G158400 hypothetical protein AT5G48100:TT10:Laccase/Diphenol oxidase family protein 61
Glyma.02G127400 hypothetical protein AT1G26190:AT1G26190:Phosphoribulokinase / Uridine kinase family 60
Glyma.13G055200 hypothetical protein AT3G02200:AT3G02200:Proteasome component (PCI) domain protein 60
Glyma.15G215600 hypothetical protein NA 60