Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55161 1-dimethylarsinoyl-decane 262.1259 263.1321 —
P55163 2-Propylphenol 136.0890 409.2738 —
P55165 601.4141 602.4200 —
P55167 17-(4-Hydroxyphenyl)heptadecanoyl adenylate 691.3377 692.3438 —
P55169 265.2467 266.2533 —
P55170 12R-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-tridecanoic acid 503.2855 504.2909 —
P55171 Phyllanthusmin C 512.1315 513.1352 —
P55175 Aspergilone A 386.1888 387.1962 —
P55176 2-Benzyl-aminoethanol 151.0991 454.3046 —
P55179 Chatferin 336.2268 337.2331 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G205800 AP1A agamous-like MADS-box AT5G60910:AGL8:AGAMOUS-like 8 61
Glyma.06G206000 hypothetical protein AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein 61
Glyma.14G198800 hypothetical protein AT1G07030:AT1G07030:Mitochondrial substrate carrier family protein 61
Glyma.14G205100 hypothetical protein NA 61
Glyma.15G215400 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 61
Glyma.16G158300 hypothetical protein AT5G43140:AT5G43140:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 61
Glyma.16G158400 hypothetical protein AT5G48100:TT10:Laccase/Diphenol oxidase family protein 61
Glyma.02G127400 hypothetical protein AT1G26190:AT1G26190:Phosphoribulokinase / Uridine kinase family 60
Glyma.13G055200 hypothetical protein AT3G02200:AT3G02200:Proteasome component (PCI) domain protein 60
Glyma.15G215600 hypothetical protein NA 60