Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02752 Polanrazine B 377.1240 378.1297 180
P06961 Norhygrine 127.0981 128.1057 180
P10476 264.6079 265.6141 180
P10479 L-Arogenate 227.0795 228.0865 180
P12237 Siwanine A 505.2575 506.2645 180
P16337 Triphyllin A 656.2395 657.2469 180
P17370 Kosinostatin 616.2046 617.2161 180
P26964 688.2990 689.3077 180
P29279 Cyromazine 166.0980 167.1049 180
P30762 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1083 123.1160 180

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G180300 hypothetical protein NA 62
Glyma.15G218700 hypothetical protein AT5G63010:AT5G63010:Transducin/WD40 repeat-like superfamily protein 62
Glyma.15G219100 hypothetical protein AT1G79310:MC7:metacaspase 7__AT1G79330:MC5:metacaspase 5 62
Glyma.15G221400 hypothetical protein NA 62
Glyma.16G018000 hypothetical protein NA 62
Glyma.18G044800 hypothetical protein NA 62
Glyma.19G032500 hypothetical protein NA 62
Glyma.02G127600 hypothetical protein NA 61
Glyma.03G039900 hypothetical protein NA 61
Glyma.05G166400 hypothetical protein NA 61