Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P03225	Chlorambucil-tertiary butyl ester	359.1400	360.1461	210
P05139		310.6259	311.6315	210
P27684		309.2743	310.2795	210
P04549	Cyclosulfamuron	421.1071	422.1091	209
P13108	Bms-707035	410.1081	411.1142	209
P14970	Benzonaphthazepine	243.1062	244.1135	209
P44253		285.6155	286.6223	209
P50982	Oleamide	281.2671	282.2752	209
P16775	PA(10:0/13:0)	522.3343	523.3435	208
P20730	1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol)	516.2330	517.2397	208

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.13G180300	hypothetical protein	NA	62
Glyma.15G218700	hypothetical protein	AT5G63010:AT5G63010:Transducin/WD40 repeat-like superfamily protein	62
Glyma.15G219100	hypothetical protein	AT1G79310:MC7:metacaspase 7__AT1G79330:MC5:metacaspase 5	62
Glyma.15G221400	hypothetical protein	NA	62
Glyma.16G018000	hypothetical protein	NA	62
Glyma.18G044800	hypothetical protein	NA	62
Glyma.19G032500	hypothetical protein	NA	62
Glyma.02G127600	hypothetical protein	NA	61
Glyma.03G039900	hypothetical protein	NA	61
Glyma.05G166400	hypothetical protein	NA	61