Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26031 Metoprolol 267.1800 268.1874 149
P29319 631.7931 632.7963 149
P29919 1,10-Epoxy-aristolane 220.1810 441.3700 149
P37738 Taxuspine A 728.3220 729.3304 149
P41603 TMC 96 356.1940 357.2010 149
P41889 Labradimil 1097.5501 1098.5538 149
P44481 1-dodecanoyl-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 726.4307 727.4379 149
P47929 CJ 14877 211.0862 212.0930 149
P48259 1a,1b-dihomo-5,9,11-trihydroxy-6E,14Z-prostadienoic acid-cyclo[8,12] 382.2739 383.2824 149
P49915 (6Z,8Z)-Hexadeca-6,8-dienedioylcarnitine 425.2704 426.2768 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G195500 hypothetical protein NA 64
Glyma.20G179600 hypothetical protein AT2G39220:PLP6:PATATIN-like protein 6__AT3G54950:pPLAIIIbeta:patatin-like protein 6 64
Glyma.01G039700 hypothetical protein AT1G10385:AT1G10385:Vps51/Vps67 family (components of vesicular transport) protein 63
Glyma.02G265700 hypothetical protein NA 63
Glyma.03G064800 hypothetical protein AT3G07170:AT3G07170:Sterile alpha motif (SAM) domain-containing protein 63
Glyma.08G183500 SWEET24 sugar efflux transporter SWEET24 AT5G13170:SAG29:senescence-associated 29 63
Glyma.17G212100 hypothetical protein NA 63
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 63
Glyma.18G044700 hypothetical protein NA 63
Glyma.06G301000 hypothetical protein NA 62