Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55199 Neoechinulin 391.1908 392.1990 —
P55200 Oxybuprocaine 308.2048 617.4153 —
P55202 Triptregeline B 653.2490 654.2596 —
P55204 Monascorubramine 381.1973 382.2060 —
P55205 PA(20:4(5Z,8Z,11Z,14Z)/14:1(9Z)) 666.4297 667.4397 —
P55208 Menaquinol 310.1940 311.2013 —
P55211 391.3353 392.3429 —
P55212 (5Z,9Z)-2-methoxy-5,9-hexacosadienoic acid 422.3731 423.3810 —
P55213 Indocarbazostatin D 512.1345 513.1415 —
P55216 160.9605 161.9681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G195500 hypothetical protein NA 64
Glyma.20G179600 hypothetical protein AT2G39220:PLP6:PATATIN-like protein 6__AT3G54950:pPLAIIIbeta:patatin-like protein 6 64
Glyma.01G039700 hypothetical protein AT1G10385:AT1G10385:Vps51/Vps67 family (components of vesicular transport) protein 63
Glyma.02G265700 hypothetical protein NA 63
Glyma.03G064800 hypothetical protein AT3G07170:AT3G07170:Sterile alpha motif (SAM) domain-containing protein 63
Glyma.08G183500 SWEET24 sugar efflux transporter SWEET24 AT5G13170:SAG29:senescence-associated 29 63
Glyma.17G212100 hypothetical protein NA 63
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 63
Glyma.18G044700 hypothetical protein NA 63
Glyma.06G301000 hypothetical protein NA 62