Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35545 616.8018 617.8091 123
P36889 Cyanazine 240.0879 241.0955 123
P37209 2,3-di-O-hexanoyl-alpha-glucopyranose 376.2115 377.2181 123
P37987 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1463 811.4444 123
P41869 Scutebarbatine H 469.2026 470.2090 123
P43011 1080.0249 1081.0336 123
P43202 3R-undecanoyloxy-2R-hydroxy-4-methylpentanoic acid methyl ester 330.2375 331.2444 123
P46986 Butyl oleate sulfate 434.2692 435.2782 123
P48228 Valerylfentanyl 364.2459 365.2510 123
P03650 4-Sinapoylquinic acid 398.1211 399.1261 122

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G195500 hypothetical protein NA 64
Glyma.20G179600 hypothetical protein AT2G39220:PLP6:PATATIN-like protein 6__AT3G54950:pPLAIIIbeta:patatin-like protein 6 64
Glyma.01G039700 hypothetical protein AT1G10385:AT1G10385:Vps51/Vps67 family (components of vesicular transport) protein 63
Glyma.02G265700 hypothetical protein NA 63
Glyma.03G064800 hypothetical protein AT3G07170:AT3G07170:Sterile alpha motif (SAM) domain-containing protein 63
Glyma.08G183500 SWEET24 sugar efflux transporter SWEET24 AT5G13170:SAG29:senescence-associated 29 63
Glyma.17G212100 hypothetical protein NA 63
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 63
Glyma.18G044700 hypothetical protein NA 63
Glyma.06G301000 hypothetical protein NA 62