Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54500 126.9627 127.9698 —
P54501 MITOGUAZONE 184.1167 185.1244 —
P54506 140.9526 141.9586 —
P54513 123.1119 124.1188 —
P54520 308.8758 309.8808 —
P54526 Lucidusculine 401.2586 402.2660 —
P54527 Taurocholic acid 3-sulfate 595.2481 596.2540 —
P54532 PE-NMe2(11D3/9D3) 823.5404 824.5486 —
P54534 Sulfur mustard 157.9693 158.9769 —
P54538 Cadalene 198.1403 199.1475 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G051600 hypothetical protein NA 1,539
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1,529
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1,527
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1,494
Glyma.16G145100 hypothetical protein NA 1,493
Glyma.08G211800 hypothetical protein NA 1,487
Glyma.18G266500 hypothetical protein NA 1,487
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1,475
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1,468
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1,463