Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54455 789.0907 790.0952 —
P54456 Darexaban glucuronide 650.2594 651.2677 —
P54462 617.4159 618.4227 —
P54463 316.8012 317.8087 —
P54465 Pentenylbenzene 146.1082 147.1157 —
P54466 (-)-4,6'-Anhydrooxysporidinone 471.3016 472.3077 —
P54467 201.1586 202.1666 —
P54468 31-Hydroxy rifabutin 862.4276 432.2210 —
P54470 Alogliptin 339.1719 340.1772 —
P54473 Tiegusanin E 650.2722 651.2779 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G051600 hypothetical protein NA 1,539
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1,529
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1,527
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1,494
Glyma.16G145100 hypothetical protein NA 1,493
Glyma.08G211800 hypothetical protein NA 1,487
Glyma.18G266500 hypothetical protein NA 1,487
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1,475
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1,468
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1,463