Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45656 Aglain B 630.2840 631.2925 117
P45744 366.6513 367.6565 117
P53375 N(6)-Monobutyryladenosine 337.1396 338.1472 117
P53643 662.1493 663.1566 117
P54509 n2-Acetyl,n6-methyllysine 202.1324 203.1390 117
P04587 Methionyl-Glutamate 278.0937 279.1010 116
P13464 Tripterygiumine T 693.2310 694.2329 116
P17580 Swietenidin B 205.0721 206.0796 116
P22655 Candoxatrilat 399.2293 400.2366 116
P25819 Thonzylamine 286.1743 287.1822 116

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G051600 hypothetical protein NA 1,539
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1,529
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1,527
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1,494
Glyma.16G145100 hypothetical protein NA 1,493
Glyma.08G211800 hypothetical protein NA 1,487
Glyma.18G266500 hypothetical protein NA 1,487
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1,475
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1,468
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1,463