Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07539 Quercetin 3-(6''-ethylglucuronide) 506.1114 507.1169 134
P07584 Xanthopappin A 172.0347 173.0429 134
P07886 3-Demethylsimmondsin 2'-(Z)-ferulate 537.1879 538.1922 134
P20347 Girolline 190.0621 191.0692 134
P20702 2-(Methylenebutyl)-cyclopropane 110.1086 111.1160 134
P23823 Tubastrindole G 509.2142 510.2207 134
P26981 Leandreanin B 774.2748 775.2841 134
P30845 methyl 9S,11R,15S,18-tetraacetoxy-5Z,13E-prostadienoate 552.2877 553.2929 134
P32272 8-Azaguanine 152.0460 153.0536 134
P33627 Vomifoliol 9-[glucosyl-(1->4)-xylosyl-(1->6)-glucoside] 680.2888 681.2956 134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G142900 hypothetical protein AT2G21860:AT2G21860:violaxanthin de-epoxidase-like protein 64
Glyma.10G233200 hypothetical protein NA 64
Glyma.10G233700 hypothetical protein AT3G49050:AT3G49050:alpha/beta-Hydrolases superfamily protein 64
Glyma.11G171500 hypothetical protein NA 64
Glyma.11G171800 hypothetical protein NA 64
Glyma.12G003900 hypothetical protein AT5G51550:EXL3:EXORDIUM like 3 64
Glyma.14G149700 hypothetical protein AT1G77590:LACS9:long chain acyl-CoA synthetase 9 64
Glyma.14G207800 hypothetical protein AT3G46940:DUT1:DUTP-PYROPHOSPHATASE-LIKE 1 64
Glyma.14G208100 hypothetical protein AT3G02680:NBS1:nijmegen breakage syndrome 1 64
Glyma.15G111900 hypothetical protein NA 64