Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P41007 | Loperamide oxide | 492.2170 | 493.2235 | 202 |
| P52185 | Reproterol | 389.1693 | 390.1778 | 202 |
| P00207 | Perfluorovaleric acid | 263.9845 | 264.9900 | 201 |
| P24923 | Paracentrone | 462.3127 | 463.3205 | 201 |
| P28922 | 1-hexadecanoyl-2-(5-oxo-valeroyl)-sn-glycero-3-phospho-(1'-myo-inositol) | 670.3308 | 671.3355 | 201 |
| P36391 | 822.1200 | 823.1290 | 201 | |
| P52233 | 232.6061 | 233.6148 | 201 | |
| P10808 | 221.0416 | 222.0470 | 200 | |
| P33620 | 7-Acetyl-11beta-acetoxydihydronomilin | 616.2508 | 617.2564 | 200 |
| P47899 | 1-(1-Phenylcyclohexyl)-4-hydroxypiperidine | 259.1988 | 260.2068 | 200 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.08G142900 | hypothetical protein | AT2G21860:AT2G21860:violaxanthin de-epoxidase-like protein | 64 | |
| Glyma.10G233200 | hypothetical protein | NA | 64 | |
| Glyma.10G233700 | hypothetical protein | AT3G49050:AT3G49050:alpha/beta-Hydrolases superfamily protein | 64 | |
| Glyma.11G171500 | hypothetical protein | NA | 64 | |
| Glyma.11G171800 | hypothetical protein | NA | 64 | |
| Glyma.12G003900 | hypothetical protein | AT5G51550:EXL3:EXORDIUM like 3 | 64 | |
| Glyma.14G149700 | hypothetical protein | AT1G77590:LACS9:long chain acyl-CoA synthetase 9 | 64 | |
| Glyma.14G207800 | hypothetical protein | AT3G46940:DUT1:DUTP-PYROPHOSPHATASE-LIKE 1 | 64 | |
| Glyma.14G208100 | hypothetical protein | AT3G02680:NBS1:nijmegen breakage syndrome 1 | 64 | |
| Glyma.15G111900 | hypothetical protein | NA | 64 |