Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P55217	Cryptophycin 52	668.2910	669.3012	—
P55219	Anadur	506.3390	507.3476	—
P55221		609.0220	610.0260	—
P55224	Hicksoane C	608.0116	609.0195	—
P55225	Haloxyline B	435.3725	436.3803	—
P55226		690.1733	691.1811	—
P55227	Pectenol A	582.4057	583.4119	—
P55228		609.6882	610.6931	—
P55232		609.7950	610.7988	—
P55233		667.3010	668.3098	—

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.15G150400		hypothetical protein	AT3G06840:AT3G06840:uncharacterized protein	65
Glyma.18G252000		hypothetical protein	AT1G02100:SBI1:Leucine carboxyl methyltransferase	65
Glyma.19G030100		hypothetical protein	NA	65
Glyma.19G030500	GmAT133		NA	65
Glyma.20G114400		hypothetical protein	AT1G68585:AT1G68585:uncharacterized protein	65
Glyma.02G203800		hypothetical protein	AT4G30935:WRKY32:WRKY DNA-binding protein 32	64
Glyma.03G064600		hypothetical protein	NA	64
Glyma.03G065700		hypothetical protein	AT2G37650:AT2G37650:GRAS family transcription factor	64
Glyma.04G044600		hypothetical protein	NA	64
Glyma.06G126700		hypothetical protein	AT5G53120:SPDS3:spermidine synthase 3	64