Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55235 607.8970 608.9062 —
P55236 Norhygrine 127.0985 128.1063 —
P55237 Briaexcavatolide K 584.2479 585.2553 —
P55238 607.9278 608.9337 —
P55239 609.5829 610.5918 —
P55243 607.9804 608.9906 —
P55244 Beilschmieflavonoid A 614.2514 615.2599 —
P55246 Dicerandrol A 666.1878 667.1909 —
P55247 609.5259 610.5340 —
P55248 Ilmofosine 525.3701 526.3741 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G217400 hypothetical protein AT3G12680:HUA1:floral homeotic protein (HUA1) 67
Glyma.19G005800 Polyribonucleotide nucleotidyltransferase 2, mitochondrial AT5G14580:AT5G14580:polyribonucleotide nucleotidyltransferase 67
Glyma.08G109400 CHS1 AT5G13930:TT4:Chalcone and stilbene synthase family protein 66
Glyma.01G170700 hypothetical protein NA 65
Glyma.02G121500 hypothetical protein NA 65
Glyma.03G021000 hypothetical protein NA 65
Glyma.03G073700 hypothetical protein NA 65
Glyma.03G202700 hypothetical protein AT5G16280:AT5G16280:Tetratricopeptide repeat (TPR)-like superfamily protein 65
Glyma.07G034300 hypothetical protein NA 65
Glyma.07G073100 hypothetical protein NA 65