Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P03225	Chlorambucil-tertiary butyl ester	359.1400	360.1461	210
P05139		310.6259	311.6315	210
P27684		309.2743	310.2795	210
P04549	Cyclosulfamuron	421.1071	422.1091	209
P13108	Bms-707035	410.1081	411.1142	209
P14970	Benzonaphthazepine	243.1062	244.1135	209
P44253		285.6155	286.6223	209
P50982	Oleamide	281.2671	282.2752	209
P16775	PA(10:0/13:0)	522.3343	523.3435	208
P20730	1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol)	516.2330	517.2397	208

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.15G217400		hypothetical protein	AT3G12680:HUA1:floral homeotic protein (HUA1)	67
Glyma.19G005800		Polyribonucleotide nucleotidyltransferase 2, mitochondrial	AT5G14580:AT5G14580:polyribonucleotide nucleotidyltransferase	67
Glyma.08G109400	CHS1		AT5G13930:TT4:Chalcone and stilbene synthase family protein	66
Glyma.01G170700		hypothetical protein	NA	65
Glyma.02G121500		hypothetical protein	NA	65
Glyma.03G021000		hypothetical protein	NA	65
Glyma.03G073700		hypothetical protein	NA	65
Glyma.03G202700		hypothetical protein	AT5G16280:AT5G16280:Tetratricopeptide repeat (TPR)-like superfamily protein	65
Glyma.07G034300		hypothetical protein	NA	65
Glyma.07G073100		hypothetical protein	NA	65