Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45201 Reduced ketanserin 397.1809 398.1901 151
P46667 1558.8251 780.4180 151
P50770 195.5809 196.5888 151
P55369 Amprenavir 505.2250 506.2316 151
P04083 2-[(4-Phenoxyphenyl)sulfonylmethyl]thiirane 306.0384 307.0460 150
P04213 5,6-Dihydroxy-7,8,4'-trimethoxyflavanone 346.1039 347.1114 150
P06527 242.0408 243.0484 150
P06756 Sertraline 305.0731 306.0811 150
P08828 Thorectandramine 437.1702 438.1784 150
P09793 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1184 427.1241 150

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G163400 hypothetical protein AT5G20350:TIP1:Ankyrin repeat family protein with DHHC zinc finger domain-containing protein 68
Glyma.16G058000 hypothetical protein AT5G15750:AT5G15750:Alpha-L RNA-binding motif/Ribosomal protein S4 family protein 68
Glyma.20G021600 PT12 AT1G20860:PHT1;8:phosphate transporter 1;8__AT1G76430:PHT1;9:phosphate transporter 1;9 68
Glyma.03G008300 hypothetical protein AT4G00400:GPAT8:glycerol-3-phosphate acyltransferase 8 67
Glyma.03G022200 hypothetical protein NA 67
Glyma.03G145900 hypothetical protein AT5G06700:AT5G06700:trichome birefringence-like protein (DUF828) 67
Glyma.06G203300 hypothetical protein AT1G18640:PSP:3-phosphoserine phosphatase 67
Glyma.08G303400 hypothetical protein NA 67
Glyma.09G210000 hypothetical protein AT5G45620:AT5G45620:Proteasome component (PCI) domain protein 67
Glyma.15G152400 hypothetical protein NA 67