Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54862 605.8809 606.8893 —
P54863 605.7784 606.7828 —
P54866 LY201116 240.1275 241.1348 —
P54869 671.1572 672.1693 —
P54870 2-Isopropylfuran 110.0722 221.1514 —
P54871 Candesartan cilexetil 610.2520 611.2601 —
P54872 Kadsurenin B 342.1516 343.1605 —
P54873 689.1570 690.1664 —
P54874 606.9143 607.9211 —
P54875 Orthosiphol L 692.2803 693.2898 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G163400 hypothetical protein AT5G20350:TIP1:Ankyrin repeat family protein with DHHC zinc finger domain-containing protein 68
Glyma.16G058000 hypothetical protein AT5G15750:AT5G15750:Alpha-L RNA-binding motif/Ribosomal protein S4 family protein 68
Glyma.20G021600 PT12 AT1G20860:PHT1;8:phosphate transporter 1;8__AT1G76430:PHT1;9:phosphate transporter 1;9 68
Glyma.03G008300 hypothetical protein AT4G00400:GPAT8:glycerol-3-phosphate acyltransferase 8 67
Glyma.03G022200 hypothetical protein NA 67
Glyma.03G145900 hypothetical protein AT5G06700:AT5G06700:trichome birefringence-like protein (DUF828) 67
Glyma.06G203300 hypothetical protein AT1G18640:PSP:3-phosphoserine phosphatase 67
Glyma.08G303400 hypothetical protein NA 67
Glyma.09G210000 hypothetical protein AT5G45620:AT5G45620:Proteasome component (PCI) domain protein 67
Glyma.15G152400 hypothetical protein NA 67