Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48358 ES-242-3 620.2242 621.2329 135
P48426 N-Stearoyl Aspartic acid 399.2929 400.3001 135
P51638 Dihydroisomorphine-6-glucuronide 463.1841 464.1922 135
P00007 488.7949 489.8019 134
P00391 Diethylthiophosphoric acid 170.0189 171.0268 134
P00835 Peneciraistin C 398.1573 399.1636 134
P00877 Lupinic acid 183.1238 184.1307 134
P02924 162.9316 163.9388 134
P05065 N-(35-hydroxy-pentatriacontanoyl)-sphing-4-enine 819.8070 820.8156 134
P06122 769.2075 770.2110 134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G031200 hypothetical protein NA 70
Glyma.20G106300 hypothetical protein AT2G16950:TRN1:transportin 1 70
Glyma.09G060100 hypothetical protein AT5G57160:ATLIG4:DNA ligase IV 69
Glyma.11G065000 hypothetical protein AT4G36730:GBF1:G-box binding factor 1 69
Glyma.14G176600 hypothetical protein NA 69
Glyma.15G222300 hypothetical protein NA 69
Glyma.20G109100 hypothetical protein AT1G14590:AT1G14590:Nucleotide-diphospho-sugar transferase family protein 69
Glyma.01G030500 hypothetical protein NA 68
Glyma.01G153300 hypothetical protein AT5G45340:CYP707A3:cytochrome P450, family 707, subfamily A, polypeptide 3__AT4G19230:CYP707A1:cytochrome P450, family 707, subfamily A, polypeptide 1 68
Glyma.09G060000 hypothetical protein NA 68