Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28434 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1834 291.1921 152
P36874 755.3385 756.3510 152
P42174 Verbesinoside E 1056.5399 1057.5471 152
P07213 Boc-L-cysteine 221.0741 222.0824 151
P12840 Isobutyl beta-D-glucopyranoside 236.1250 237.1317 151
P18633 Butanedioic acid, octenyl- 228.1353 229.1411 151
P20625 Lamiuside D 816.2663 817.2710 151
P26089 Kni 102 595.2949 596.3000 151
P31937 173.1467 174.1553 151
P43039 10-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-decanoic acid 461.2433 462.2502 151

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G201400 hypothetical protein AT5G06140:SNX1:sorting nexin 1 70
Glyma.04G096300 hypothetical protein NA 70
Glyma.04G124600 hypothetical protein NA 70
Glyma.09G068500 PHD6 PHD finger protein GmPHD6 AT5G20510:AL5:alfin-like 5 70
Glyma.14G071900 hypothetical protein AT1G19650:AT1G19650:Sec14p-like phosphatidylinositol transfer family protein__AT1G75370:AT1G75370:Sec14p-like phosphatidylinositol transfer family protein 70
Glyma.14G135100 hypothetical protein AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 70
Glyma.14G210000 hypothetical protein AT1G65910:NAC028:NAC domain containing protein 28 70
Glyma.14G210400 hypothetical protein AT3G03210:AT3G03210:Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein 70
Glyma.14G210500 hypothetical protein AT3G03220:EXPA13:expansin A13 70
Glyma.15G216800 hypothetical protein NA 70