Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G201400 hypothetical protein AT5G06140:SNX1:sorting nexin 1 70
Glyma.04G096300 hypothetical protein NA 70
Glyma.04G124600 hypothetical protein NA 70
Glyma.09G068500 PHD6 PHD finger protein GmPHD6 AT5G20510:AL5:alfin-like 5 70
Glyma.14G071900 hypothetical protein AT1G19650:AT1G19650:Sec14p-like phosphatidylinositol transfer family protein__AT1G75370:AT1G75370:Sec14p-like phosphatidylinositol transfer family protein 70
Glyma.14G135100 hypothetical protein AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 70
Glyma.14G210000 hypothetical protein AT1G65910:NAC028:NAC domain containing protein 28 70
Glyma.14G210400 hypothetical protein AT3G03210:AT3G03210:Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein 70
Glyma.14G210500 hypothetical protein AT3G03220:EXPA13:expansin A13 70
Glyma.15G216800 hypothetical protein NA 70