Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P29783 Triptregeline I 589.2398 590.2460 138
P30687 623.7960 624.8037 138
P33333 873.1893 874.1999 138
P39647 1,10-Epoxy-aristolane 220.1808 441.3688 138
P41900 Sinuolatin A 396.2153 397.2208 138
P41927 6beta-(2'-Methylbutanoyloxy)-10beta-hydroxy-8alpha-methoxyeremophil-7(11)-en-12,8beta-olide 380.2187 381.2246 138
P43144 545.2495 546.2561 138
P48892 (3E,5Z)-1,3,5-Heptatriene 94.0774 95.0849 138
P51053 519.1231 520.1312 138
P00197 173.0305 174.0385 137

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G098200 hypothetical protein AT2G32480:ARASP:chloroplastic membrane metallo proteases__AT1G05140:AT1G05140:Peptidase M50 family protein 71
Glyma.14G191400 hypothetical protein NA 71
Glyma.14G210700 hypothetical protein NA 71
Glyma.15G150300 hypothetical protein AT5G49130:AT5G49130:MATE efflux family protein 71
Glyma.15G222400 hypothetical protein NA 71
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 71
Glyma.18G090600 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 71
Glyma.02G200600 hypothetical protein AT3G11570:TBL8:TRICHOME BIREFRINGENCE-LIKE 8__AT5G06230:TBL9:TRICHOME BIREFRINGENCE-LIKE 9 70
Glyma.02G200700 hypothetical protein AT3G11560:AT3G11560:LETM1-like protein__AT5G06220:AT5G06220:LETM1-like protein 70
Glyma.02G201100 hypothetical protein AT5G06200:CASP4:Uncharacterized protein family (UPF0497) 70