Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P10446 Euchrenone a14 472.2284 473.2320 168
P13647 982.2182 983.2289 168
P13935 Malvidin 3-glucoside-5-(6-acetylglucoside) 698.1805 699.1815 168
P19115 Israpafant 488.1842 489.1914 168
P22796 Argylioside 704.2463 705.2566 168
P33387 Altretamine 210.1598 211.1668 168
P37674 Blebbistatin 292.1218 293.1314 168
P42321 N3-Cyclopropyl-7-[(4-propan-2-ylphenyl)methyl]pyrrolo[3,2-f]quinazoline-1,3-diamine 371.2129 743.4342 168
P45697 Cadalene 198.1396 199.1481 168
P06307 915.2578 916.2666 167

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G098200 hypothetical protein AT2G32480:ARASP:chloroplastic membrane metallo proteases__AT1G05140:AT1G05140:Peptidase M50 family protein 71
Glyma.14G191400 hypothetical protein NA 71
Glyma.14G210700 hypothetical protein NA 71
Glyma.15G150300 hypothetical protein AT5G49130:AT5G49130:MATE efflux family protein 71
Glyma.15G222400 hypothetical protein NA 71
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 71
Glyma.18G090600 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 71
Glyma.02G200600 hypothetical protein AT3G11570:TBL8:TRICHOME BIREFRINGENCE-LIKE 8__AT5G06230:TBL9:TRICHOME BIREFRINGENCE-LIKE 9 70
Glyma.02G200700 hypothetical protein AT3G11560:AT3G11560:LETM1-like protein__AT5G06220:AT5G06220:LETM1-like protein 70
Glyma.02G201100 hypothetical protein AT5G06200:CASP4:Uncharacterized protein family (UPF0497) 70