Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31675 N-Deisopropyl-fluvastatin 369.1340 370.1426 184
P34634 1-(4-Hydroxy-3,5-dimethoxyphenyl)-7-(4-hydroxy-3-methoxyphenyl)-3,5-heptanediol 406.1959 407.2047 184
P38526 509.1856 510.1928 184
P46681 Selanc 751.4280 752.4357 184
P46758 Cyclovirobuxeine F 560.3627 561.3709 184
P06565 N-[(5-{2-[(6R)-2-Amino-4-oxo-3,4,5,6,7,8-hexahydropyrido[2,3-D]pyrimidin-6-YL]ethyl}-2-thienyl)carbonyl]-L-glutamic acid 449.1443 450.1521 183
P13918 Trifuhalol B 390.0568 391.0648 183
P15055 alpha-(Dimethylaminomethyl)-2-(3-ethyl-5-methyl-4-isoxazolyl)-1H-indole-3-methanol 313.1763 314.1834 183
P15192 Mycalolide A 908.4443 909.4491 183
P20611 cis-1,2-Dihydroxy-1,2-dihydro-7-hydroxymethylnaphthalene 192.0788 193.0851 183

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G098200 hypothetical protein AT2G32480:ARASP:chloroplastic membrane metallo proteases__AT1G05140:AT1G05140:Peptidase M50 family protein 71
Glyma.14G191400 hypothetical protein NA 71
Glyma.14G210700 hypothetical protein NA 71
Glyma.15G150300 hypothetical protein AT5G49130:AT5G49130:MATE efflux family protein 71
Glyma.15G222400 hypothetical protein NA 71
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 71
Glyma.18G090600 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 71
Glyma.02G200600 hypothetical protein AT3G11570:TBL8:TRICHOME BIREFRINGENCE-LIKE 8__AT5G06230:TBL9:TRICHOME BIREFRINGENCE-LIKE 9 70
Glyma.02G200700 hypothetical protein AT3G11560:AT3G11560:LETM1-like protein__AT5G06220:AT5G06220:LETM1-like protein 70
Glyma.02G201100 hypothetical protein AT5G06200:CASP4:Uncharacterized protein family (UPF0497) 70