Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11263 Psilostachyin C 264.1332 265.1404 224
P14345 Levetiracetam 170.1025 171.1105 224
P17555 Latrunculin C 397.1929 398.2009 224
P42432 Phthalsaurediethylhexylester 306.1820 613.3715 224
P40215 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5413 1006.5526 223
P07094 5-(Methoxymethyl)-1H-pyrrole-2-carbaldehyde 139.0620 140.0688 222
P38156 Montanastatin 740.4093 741.4144 222
P41025 CDP-DG(i-15:0/20:4(5Z,8Z,11Z,13E)+=O(15)) 1001.4851 1002.4923 222
P06065 4-Toluenesulfonamide 171.0341 172.0404 221
P13789 (2S,3S)-3-Hydroxyasparagine 148.0485 149.0561 221

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G098200 hypothetical protein AT2G32480:ARASP:chloroplastic membrane metallo proteases__AT1G05140:AT1G05140:Peptidase M50 family protein 71
Glyma.14G191400 hypothetical protein NA 71
Glyma.14G210700 hypothetical protein NA 71
Glyma.15G150300 hypothetical protein AT5G49130:AT5G49130:MATE efflux family protein 71
Glyma.15G222400 hypothetical protein NA 71
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 71
Glyma.18G090600 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 71
Glyma.02G200600 hypothetical protein AT3G11570:TBL8:TRICHOME BIREFRINGENCE-LIKE 8__AT5G06230:TBL9:TRICHOME BIREFRINGENCE-LIKE 9 70
Glyma.02G200700 hypothetical protein AT3G11560:AT3G11560:LETM1-like protein__AT5G06220:AT5G06220:LETM1-like protein 70
Glyma.02G201100 hypothetical protein AT5G06200:CASP4:Uncharacterized protein family (UPF0497) 70