Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54778 8'-Hydroxy-3-methoxy isodiospyrin 420.0827 421.0871 —
P54779 beta-Doradecin 580.3892 581.3981 —
P54780 Pirenzepine 351.1705 352.1780 —
P54782 Tripeptide 549.2479 550.2541 —
P54783 16S-methyl-sphing-4-enine 313.2937 314.3018 —
P54784 D-Glucosyldihydrosphingosine 463.3451 464.3554 —
P54786 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2579 391.2624 —
P54788 17beta-Hydroxy-7alpha-methylandrost-4-en-3-one 302.2187 303.2265 —
P54790 Leucyl-Threonine 232.1438 233.1507 —
P54795 Foetisulfide A 224.0352 225.0433 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G040200 hypothetical protein NA 74
Glyma.08G199800 hypothetical protein NA 74
Glyma.11G105600 hypothetical protein NA 74
Glyma.11G184400 hypothetical protein NA 74
Glyma.12G098300 hypothetical protein NA 74
Glyma.15G140500 hypothetical protein NA 74
Glyma.15G219400 hypothetical protein NA 74
Glyma.16G066000 hypothetical protein AT5G40660:AT5G40660:ATP12 protein-like protein 74
Glyma.02G126400 hypothetical protein NA 73
Glyma.08G137600 hypothetical protein AT4G39780:AT4G39780:Integrase-type DNA-binding superfamily protein 73