Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54876 603.2250 604.2295 —
P54879 531.3880 532.3948 —
P54880 360.2884 361.2940 —
P54883 N-Linoleoyl Valine 379.3058 380.3127 —
P54893 606.8184 607.8238 —
P54895 844.0016 845.0097 —
P54899 Ligurobustoside O 622.2595 623.2642 —
P54900 606.0010 607.0054 —
P54902 NADPH 745.0835 746.0902 —
P54903 606.8463 607.8539 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G215500 KNAT5 NA 1,609
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1,604
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G61560:MLO6:Seven transmembrane MLO family protein 1,593
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1,576
Glyma.09G058900 hypothetical protein NA 1,562
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1,558
Glyma.03G209700 hypothetical protein NA 1,555
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1,548
Glyma.11G050600 hypothetical protein NA 1,548
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1,543