Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54433 Glycylserylprolylmethionylphenylalanylvalinamide 635.3142 636.3159 —
P54436 Xylaroside B 328.1515 329.1571 —
P54440 P,P-Dioctyldiphenylamine 393.3404 394.3453 —
P54443 (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile 202.1256 203.1348 —
P54444 5-Hydroxymethyl tolterodine 341.2352 342.2416 —
P54445 704.3167 705.3231 —
P54446 Butyl cinnamate 204.1138 205.1219 —
P54447 Delavaconine 393.2523 394.2580 —
P54450 Ilamine 313.1844 314.1891 —
P54451 Tetradecadienyl-l-carnitine 353.2895 354.2973 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G215500 KNAT5 NA 1,609
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1,604
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G61560:MLO6:Seven transmembrane MLO family protein 1,593
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1,576
Glyma.09G058900 hypothetical protein NA 1,562
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1,558
Glyma.03G209700 hypothetical protein NA 1,555
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1,548
Glyma.11G050600 hypothetical protein NA 1,548
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1,543