Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P20196 Quinomycin B0 1112.3986 1113.3990 122
P28062 425.6862 426.6958 122
P30963 372.7183 373.7242 122
P31492 4-[(E)-2-(7-Heptoxy-4,4-dimethyl-1,1-dioxo-2,3-dihydrothiochromen-6-yl)prop-1-enyl]benzoic acid 484.2281 485.2335 122
P32236 14-hydroxy-11Z,17Z-eicosadienoic acid 324.2632 325.2710 122
P36511 Delavirdine 456.1966 457.2036 122
P37714 Sesamol 138.0311 415.1011 122
P39072 chiglitazar 572.2152 573.2187 122
P42247 1096.0138 1097.0197 122
P42729 1-(6Z,9Z,12Z-octadecatrienoyl)-2-(5Z,8Z,11Z,14Z,17Z-eicosapentaenoyl)-glycero-3-phospho-(1'-myo-inositol) 878.4971 879.5067 122

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G215500 KNAT5 NA 1,609
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1,604
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G61560:MLO6:Seven transmembrane MLO family protein 1,593
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1,576
Glyma.09G058900 hypothetical protein NA 1,562
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1,558
Glyma.03G209700 hypothetical protein NA 1,555
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1,548
Glyma.11G050600 hypothetical protein NA 1,548
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1,543