Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11441 Fura-2 641.1570 642.1631 130
P16502 Aristolindiquinone 218.0576 219.0642 130
P20755 Neo-S-petasin 334.1597 335.1664 130
P20905 787.3606 788.3693 130
P23214 Robustaflavone 7''-methyl ether 552.1063 553.1134 130
P23422 Tryptophol [xylosyl-(1->6)-glucoside] 455.1791 456.1854 130
P28058 Huperzine T 277.1650 278.1731 130
P30000 N-(1-methyl-2-hydroxy-2-phenyl-ethyl)-5Z,8Z,11Z,14Z-eicosatetraenoyl amine 437.3308 438.3417 130
P31683 105.0290 106.0365 130
P32485 Dichotosinin 478.1811 479.1865 130

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G215500 KNAT5 NA 1,609
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1,604
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G61560:MLO6:Seven transmembrane MLO family protein 1,593
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1,576
Glyma.09G058900 hypothetical protein NA 1,562
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1,558
Glyma.03G209700 hypothetical protein NA 1,555
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1,548
Glyma.11G050600 hypothetical protein NA 1,548
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1,543