Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54929 1,3-Diisopropylbenzene 162.1388 163.1452 —
P54932 Punicatannin C 660.1684 661.1736 —
P54933 Hydroxyglimepiride 506.2176 507.2232 —
P54939 302.6174 303.6228 —
P54940 Diallyl hexasulfide 273.9157 274.9231 —
P54942 Darapladib 666.2701 667.2786 —
P54943 Stellettin H 508.3192 509.3291 —
P54944 Boceprevir 519.3457 520.3517 —
P54946 DL-Methionine-4-antipyrineamide 334.1464 335.1552 —
P54949 335.1497 336.1575 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G070300 hypothetical protein AT2G45910:AT2G45910:U-box domain-containing protein kinase family protein 75
Glyma.12G098000 hypothetical protein NA 75
Glyma.14G087900 hypothetical protein NA 75
Glyma.14G177500 hypothetical protein AT3G13620:PUT4:Amino acid permease family protein 75
Glyma.15G219300 hypothetical protein AT1G79380:RGLG4:Ca(2)-dependent phospholipid-binding protein (Copine) family 75
Glyma.16G134500 hypothetical protein NA 75
Glyma.16G144200 hypothetical protein AT3G50380:AT3G50380:vacuolar protein sorting-associated protein, putative (DUF1162) 75
Glyma.17G213000 hypothetical protein NA 75
Glyma.02G109200 hypothetical protein AT1G14180:AT1G14180:RING/U-box superfamily protein 74
Glyma.06G285400 hypothetical protein AT1G06290:ACX3:acyl-CoA oxidase 3 74