Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P48358	ES-242-3	620.2242	621.2329	135
P48426	N-Stearoyl Aspartic acid	399.2929	400.3001	135
P51638	Dihydroisomorphine-6-glucuronide	463.1841	464.1922	135
P00007		488.7949	489.8019	134
P00391	Diethylthiophosphoric acid	170.0189	171.0268	134
P00835	Peneciraistin C	398.1573	399.1636	134
P00877	Lupinic acid	183.1238	184.1307	134
P02924		162.9316	163.9388	134
P05065	N-(35-hydroxy-pentatriacontanoyl)-sphing-4-enine	819.8070	820.8156	134
P06122		769.2075	770.2110	134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.15G257500		hypothetical protein	NA	77
Glyma.16G055700		hypothetical protein	AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily	77
Glyma.18G111000	F6'H1	feruloyl CoA ortho-hydroxylase 1	NA	77
Glyma.04G096500		hypothetical protein	NA	76
Glyma.04G096600		hypothetical protein	AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4	76
Glyma.04G096800		hypothetical protein	AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2	76
Glyma.06G276300		hypothetical protein	NA	76
Glyma.08G150400		hypothetical protein	NA	76
Glyma.18G072800		hypothetical protein	AT1G55760:AT1G55760:BTB/POZ domain-containing protein	76
Glyma.07G010600		hypothetical protein	NA	75