Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P55217	Cryptophycin 52	668.2910	669.3012	—
P55219	Anadur	506.3390	507.3476	—
P55221		609.0220	610.0260	—
P55224	Hicksoane C	608.0116	609.0195	—
P55225	Haloxyline B	435.3725	436.3803	—
P55226		690.1733	691.1811	—
P55227	Pectenol A	582.4057	583.4119	—
P55228		609.6882	610.6931	—
P55232		609.7950	610.7988	—
P55233		667.3010	668.3098	—

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.15G257500		hypothetical protein	NA	77
Glyma.16G055700		hypothetical protein	AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily	77
Glyma.18G111000	F6'H1	feruloyl CoA ortho-hydroxylase 1	NA	77
Glyma.04G096500		hypothetical protein	NA	76
Glyma.04G096600		hypothetical protein	AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4	76
Glyma.04G096800		hypothetical protein	AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2	76
Glyma.06G276300		hypothetical protein	NA	76
Glyma.08G150400		hypothetical protein	NA	76
Glyma.18G072800		hypothetical protein	AT1G55760:AT1G55760:BTB/POZ domain-containing protein	76
Glyma.07G010600		hypothetical protein	NA	75