Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54500 126.9627 127.9698 —
P54501 MITOGUAZONE 184.1167 185.1244 —
P54506 140.9526 141.9586 —
P54513 123.1119 124.1188 —
P54520 308.8758 309.8808 —
P54526 Lucidusculine 401.2586 402.2660 —
P54527 Taurocholic acid 3-sulfate 595.2481 596.2540 —
P54532 PE-NMe2(11D3/9D3) 823.5404 824.5486 —
P54534 Sulfur mustard 157.9693 158.9769 —
P54538 Cadalene 198.1403 199.1475 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G257500 hypothetical protein NA 77
Glyma.16G055700 hypothetical protein AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily 77
Glyma.18G111000 F6'H1 feruloyl CoA ortho-hydroxylase 1 NA 77
Glyma.04G096500 hypothetical protein NA 76
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 76
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 76
Glyma.06G276300 hypothetical protein NA 76
Glyma.08G150400 hypothetical protein NA 76
Glyma.18G072800 hypothetical protein AT1G55760:AT1G55760:BTB/POZ domain-containing protein 76
Glyma.07G010600 hypothetical protein NA 75