Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54369 Norplicacetin 503.2359 504.2432 —
P54373 Acutifolidine 371.1757 372.1852 —
P54374 Variecolorin H 353.1725 354.1821 —
P54378 Unanisoflavan 370.1780 371.1867 —
P54379 1-(3,4-Dichlorophenyl)urea 203.9836 204.9902 —
P54380 N,N-(2,2-dihydroxy-ethyl)-5Z,8Z,11Z,14Z-eicosatetraenoyl amine 391.3033 392.3095 —
P54381 473.3840 474.3911 —
P54382 240.8763 241.8835 —
P54383 Phthalic anhydride 148.0144 149.0224 —
P54384 335.1442 336.1518 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G257500 hypothetical protein NA 77
Glyma.16G055700 hypothetical protein AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily 77
Glyma.18G111000 F6'H1 feruloyl CoA ortho-hydroxylase 1 NA 77
Glyma.04G096500 hypothetical protein NA 76
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 76
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 76
Glyma.06G276300 hypothetical protein NA 76
Glyma.08G150400 hypothetical protein NA 76
Glyma.18G072800 hypothetical protein AT1G55760:AT1G55760:BTB/POZ domain-containing protein 76
Glyma.07G010600 hypothetical protein NA 75