Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22470 Lithospermoside 329.1094 330.1174 178
P23442 S-(N-Hydroxy-N-methylcarbamoyl)glutathione 380.0975 381.1026 178
P23530 S-Isopropyl 3-methylbut-2-enethioate 158.0767 159.0843 178
P32974 499.7155 500.7233 178
P33573 Torokonine 449.2234 450.2276 178
P37745 Altromycin I 693.2714 694.2799 178
P48147 2-Isopropylfuran 110.0728 111.0801 178
P13948 O-Desmethyl Gefitinib 432.1359 433.1430 177
P18650 U 77803 806.2183 807.2228 177
P26580 475.6741 476.6782 177

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G257500 hypothetical protein NA 77
Glyma.16G055700 hypothetical protein AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily 77
Glyma.18G111000 F6'H1 feruloyl CoA ortho-hydroxylase 1 NA 77
Glyma.04G096500 hypothetical protein NA 76
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 76
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 76
Glyma.06G276300 hypothetical protein NA 76
Glyma.08G150400 hypothetical protein NA 76
Glyma.18G072800 hypothetical protein AT1G55760:AT1G55760:BTB/POZ domain-containing protein 76
Glyma.07G010600 hypothetical protein NA 75