Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P20196 Quinomycin B0 1112.3986 1113.3990 122
P28062 425.6862 426.6958 122
P30963 372.7183 373.7242 122
P31492 4-[(E)-2-(7-Heptoxy-4,4-dimethyl-1,1-dioxo-2,3-dihydrothiochromen-6-yl)prop-1-enyl]benzoic acid 484.2281 485.2335 122
P32236 14-hydroxy-11Z,17Z-eicosadienoic acid 324.2632 325.2710 122
P36511 Delavirdine 456.1966 457.2036 122
P37714 Sesamol 138.0311 415.1011 122
P39072 chiglitazar 572.2152 573.2187 122
P42247 1096.0138 1097.0197 122
P42729 1-(6Z,9Z,12Z-octadecatrienoyl)-2-(5Z,8Z,11Z,14Z,17Z-eicosapentaenoyl)-glycero-3-phospho-(1'-myo-inositol) 878.4971 879.5067 122

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G257500 hypothetical protein NA 77
Glyma.16G055700 hypothetical protein AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily 77
Glyma.18G111000 F6'H1 feruloyl CoA ortho-hydroxylase 1 NA 77
Glyma.04G096500 hypothetical protein NA 76
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 76
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 76
Glyma.06G276300 hypothetical protein NA 76
Glyma.08G150400 hypothetical protein NA 76
Glyma.18G072800 hypothetical protein AT1G55760:AT1G55760:BTB/POZ domain-containing protein 76
Glyma.07G010600 hypothetical protein NA 75