Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P39157 2-Cyanomethylene-1-glucosyloxy-3-hydroxy-4,5-dimethoxycyclohexane 375.1531 376.1603 124
P40011 Caledonixanthone B 278.0952 279.1011 124
P42908 1047.0463 1048.0559 124
P44929 Pemigatinib 487.2058 488.2132 124
P47805 3''-Adenylylspectinomycin 661.2071 662.2127 124
P49409 2,4-Diamino-6-dimethylamino-1,3,5-triazine 154.0974 155.1054 124
P52404 879.3783 880.3854 124
P52519 Glyinflanin J 390.1798 391.1850 124
P53245 258.8909 259.8968 124
P09432 Metronidazole benzoate 275.0895 276.0962 123

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G257500 hypothetical protein NA 77
Glyma.16G055700 hypothetical protein AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily 77
Glyma.18G111000 F6'H1 feruloyl CoA ortho-hydroxylase 1 NA 77
Glyma.04G096500 hypothetical protein NA 76
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 76
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 76
Glyma.06G276300 hypothetical protein NA 76
Glyma.08G150400 hypothetical protein NA 76
Glyma.18G072800 hypothetical protein AT1G55760:AT1G55760:BTB/POZ domain-containing protein 76
Glyma.07G010600 hypothetical protein NA 75