Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P17402	Stenopalustroside E	966.2688	967.2721	340
P22371		352.6573	353.6630	314
P13413	(4-Ethylnaphthalen-1-yl)[1-(5-fluoropentyl)-1H-indol-3-yl]methanone	387.2022	388.2077	311
P13744	Mutangin	636.2571	637.2635	310
P40835	Gnidicin-20-palmitate	866.4613	867.4696	309
P42556	Arboreaside B	1104.5548	1105.5612	304
P16221	Ganomastenol C	254.1849	255.1926	299
P15142		521.2481	522.2554	297
P34561		818.1767	819.1780	295
P00008		281.8737	282.8810	292

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.15G257500		hypothetical protein	NA	77
Glyma.16G055700		hypothetical protein	AT3G56320:AT3G56320:PAP/OAS1 substrate-binding domain superfamily	77
Glyma.18G111000	F6'H1	feruloyl CoA ortho-hydroxylase 1	NA	77
Glyma.04G096500		hypothetical protein	NA	76
Glyma.04G096600		hypothetical protein	AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4	76
Glyma.04G096800		hypothetical protein	AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2	76
Glyma.06G276300		hypothetical protein	NA	76
Glyma.08G150400		hypothetical protein	NA	76
Glyma.18G072800		hypothetical protein	AT1G55760:AT1G55760:BTB/POZ domain-containing protein	76
Glyma.07G010600		hypothetical protein	NA	75